STRINGSTRING
AGI25792.1 AGI25792.1 AGI23013.1 AGI23013.1 AGI22335.1 AGI22335.1 AGI23374.1 AGI23374.1 AGI22304.1 AGI22304.1 AGI25919.1 AGI25919.1 AGI25688.1 AGI25688.1 AGI25320.1 AGI25320.1 AGI23397.1 AGI23397.1 AGI25188.1 AGI25188.1 AGI26761.1 AGI26761.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI25792.1Putative regulatory protein; COG0776 Bacterial nucleoid DNA-binding protein. (120 aa)    
Predicted Functional Partners:
AGI23013.1
Hypothetical protein.
  
     0.723
AGI22335.1
Hypothetical protein.
  
     0.709
AGI23374.1
Hypothetical protein.
  
     0.707
AGI22304.1
COG1289 Predicted membrane protein.
  
     0.659
AGI25919.1
Hypothetical protein; COG0392 Predicted integral membrane protein.
  
     0.649
AGI25688.1
COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain.
  
     0.638
AGI25320.1
COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA; Belongs to the UPF0149 family.
  
     0.616
AGI23397.1
COG2825 Outer membrane protein.
  
     0.591
AGI25188.1
Hypothetical protein; COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases.
  
     0.578
AGI26761.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.572
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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