STRINGSTRING
AGI25892.1 AGI25892.1 AGI23772.1 AGI23772.1 AGI23554.1 AGI23554.1 AGI23341.1 AGI23341.1 glcB glcB AGI25774.1 AGI25774.1 AGI22398.1 AGI22398.1 AGI23555.1 AGI23555.1 AGI23774.1 AGI23774.1 AGI24618.1 AGI24618.1 AGI25526.1 AGI25526.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGI25892.1COG1052 Lactate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (321 aa)    
Predicted Functional Partners:
AGI23772.1
Putative hydroxypyruvate reductase; COG2379 Putative glycerate kinase.
 
 0.933
AGI23554.1
FAD linked oxidase domain-containing protein; COG0277 FAD/FMN-containing dehydrogenases.
 
 
 0.925
AGI23341.1
COG1929 Glycerate kinase; Belongs to the glycerate kinase type-1 family.
 
  
 0.924
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
 
 0.918
AGI25774.1
Putative 2-hydroxyacid dehydrogenase; COG1052 Lactate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
  
 
0.918
AGI22398.1
Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
 
  
 0.915
AGI23555.1
Glycolate oxidase subunit GlcD; COG0277 FAD/FMN-containing dehydrogenases.
   
 0.915
AGI23774.1
COG3622 Hydroxypyruvate isomerase; Belongs to the hyi family.
   
 
 0.908
AGI24618.1
COG2224 Isocitrate lyase.
     
 0.908
AGI25526.1
COG3622 Hydroxypyruvate isomerase; Belongs to the hyi family.
   
 
 0.908
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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