Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI23064.1 | AGI25895.1 | H681_05920 | H681_20140 | Hypothetical protein. | Lysine-specific permease; COG0833 Amino acid transporters. | 0.440 |
AGI25892.1 | AGI25893.1 | H681_20125 | H681_20130 | COG1052 Lactate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Hypothetical protein. | 0.779 |
AGI25892.1 | AGI25895.1 | H681_20125 | H681_20140 | COG1052 Lactate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Lysine-specific permease; COG0833 Amino acid transporters. | 0.417 |
AGI25892.1 | rsmC | H681_20125 | H681_20135 | COG1052 Lactate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Ribosomal RNA small subunit methyltransferase C; Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle; Belongs to the methyltransferase superfamily. RsmC family. | 0.654 |
AGI25893.1 | AGI25892.1 | H681_20130 | H681_20125 | Hypothetical protein. | COG1052 Lactate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.779 |
AGI25893.1 | AGI25895.1 | H681_20130 | H681_20140 | Hypothetical protein. | Lysine-specific permease; COG0833 Amino acid transporters. | 0.425 |
AGI25893.1 | rsmC | H681_20130 | H681_20135 | Hypothetical protein. | Ribosomal RNA small subunit methyltransferase C; Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle; Belongs to the methyltransferase superfamily. RsmC family. | 0.613 |
AGI25895.1 | AGI23064.1 | H681_20140 | H681_05920 | Lysine-specific permease; COG0833 Amino acid transporters. | Hypothetical protein. | 0.440 |
AGI25895.1 | AGI25892.1 | H681_20140 | H681_20125 | Lysine-specific permease; COG0833 Amino acid transporters. | COG1052 Lactate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.417 |
AGI25895.1 | AGI25893.1 | H681_20140 | H681_20130 | Lysine-specific permease; COG0833 Amino acid transporters. | Hypothetical protein. | 0.425 |
AGI25895.1 | AGI25896.1 | H681_20140 | H681_20145 | Lysine-specific permease; COG0833 Amino acid transporters. | COG2119 Predicted membrane protein. | 0.426 |
AGI25895.1 | AGI26592.1 | H681_20140 | H681_23625 | Lysine-specific permease; COG0833 Amino acid transporters. | COG0531 Amino acid transporters. | 0.575 |
AGI25895.1 | rsmC | H681_20140 | H681_20135 | Lysine-specific permease; COG0833 Amino acid transporters. | Ribosomal RNA small subunit methyltransferase C; Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle; Belongs to the methyltransferase superfamily. RsmC family. | 0.538 |
AGI25896.1 | AGI25895.1 | H681_20145 | H681_20140 | COG2119 Predicted membrane protein. | Lysine-specific permease; COG0833 Amino acid transporters. | 0.426 |
AGI26592.1 | AGI25895.1 | H681_23625 | H681_20140 | COG0531 Amino acid transporters. | Lysine-specific permease; COG0833 Amino acid transporters. | 0.575 |
rsmC | AGI25892.1 | H681_20135 | H681_20125 | Ribosomal RNA small subunit methyltransferase C; Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle; Belongs to the methyltransferase superfamily. RsmC family. | COG1052 Lactate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.654 |
rsmC | AGI25893.1 | H681_20135 | H681_20130 | Ribosomal RNA small subunit methyltransferase C; Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle; Belongs to the methyltransferase superfamily. RsmC family. | Hypothetical protein. | 0.613 |
rsmC | AGI25895.1 | H681_20135 | H681_20140 | Ribosomal RNA small subunit methyltransferase C; Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle; Belongs to the methyltransferase superfamily. RsmC family. | Lysine-specific permease; COG0833 Amino acid transporters. | 0.538 |