STRINGSTRING
AGI25919.1 AGI25919.1 AGI22335.1 AGI22335.1 AGI23013.1 AGI23013.1 AGI25922.1 AGI25922.1 AGI25792.1 AGI25792.1 AGI25945.1 AGI25945.1 AGI23787.1 AGI23787.1 AGI22094.1 AGI22094.1 AGI24364.1 AGI24364.1 AGI25682.1 AGI25682.1 AGI26156.1 AGI26156.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI25919.1Hypothetical protein; COG0392 Predicted integral membrane protein. (332 aa)    
Predicted Functional Partners:
AGI22335.1
Hypothetical protein.
  
     0.721
AGI23013.1
Hypothetical protein.
  
     0.692
AGI25922.1
Transcriptional regulator MvaT, P16 subunit.
  
     0.663
AGI25792.1
Putative regulatory protein; COG0776 Bacterial nucleoid DNA-binding protein.
  
     0.649
AGI25945.1
Acyltransferase; COG1835 Predicted acyltransferases.
 
   
 0.645
AGI23787.1
Transcriptional regulator.
  
     0.641
AGI22094.1
Hydrolase; COG3568 Metal-dependent hydrolase.
 
  
 0.621
AGI24364.1
Transcriptional regulator MvaV; COG4992 Ornithine/acetylornithine aminotransferase.
  
     0.620
AGI25682.1
COG4519 Uncharacterized protein conserved in bacteria.
  
     0.556
AGI26156.1
Hypothetical protein.
  
     0.534
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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