STRINGSTRING
AGI26152.1 AGI26152.1 AGI24792.1 AGI24792.1 AGI26153.1 AGI26153.1 AGI26151.1 AGI26151.1 AGI24910.1 AGI24910.1 AGI25880.1 AGI25880.1 AGI26154.1 AGI26154.1 cmoM cmoM AGI22534.1 AGI22534.1 AGI25392.1 AGI25392.1
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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AGI26152.1Putative transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. (335 aa)    
Predicted Functional Partners:
AGI24792.1
AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.774
AGI26153.1
Hypothetical protein; COG2030 Acyl dehydratase.
 
     0.608
AGI26151.1
Putative signal transduction protein with EFhand domain; COG5126 Ca2+-binding protein (EF-Hand superfamily).
       0.584
AGI24910.1
Hydrolase; COG3687 Predicted metal-dependent hydrolase.
  
     0.490
AGI25880.1
Metal-dependent hydrolase-like protein; COG3687 Predicted metal-dependent hydrolase.
  
     0.488
AGI26154.1
Hypothetical protein; COG1694 Predicted pyrophosphatase.
       0.456
cmoM
Hypothetical protein; Catalyzes the methylation of 5-carboxymethoxyuridine (cmo5U) to form 5-methoxycarbonylmethoxyuridine (mcmo5U) at position 34 in tRNAs; Belongs to the class I-like SAM-binding methyltransferase superfamily. CmoM family.
       0.456
AGI22534.1
Hypothetical protein; COG3315 O-Methyltransferase involved in polyketide biosynthesis.
  
     0.426
AGI25392.1
Putative hydrolase; COG3687 Predicted metal-dependent hydrolase.
  
     0.417
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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