STRINGSTRING
AGI26157.1 AGI26157.1 AGI26158.1 AGI26158.1 AGI26159.1 AGI26159.1 AGI26156.1 AGI26156.1 AGI26160.1 AGI26160.1 ddpX-2 ddpX-2 AGI24273.1 AGI24273.1 AGI26154.1 AGI26154.1 AGI25862.1 AGI25862.1 cmoM cmoM AGI26025.1 AGI26025.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI26157.1Lipoprotein. (186 aa)    
Predicted Functional Partners:
AGI26158.1
GNAT family acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
       0.772
AGI26159.1
Hypothetical protein; COG2044 Predicted peroxiredoxins.
       0.772
AGI26156.1
Hypothetical protein.
 
    
0.658
AGI26160.1
COG0509 Glycine cleavage system H protein (lipoate-binding).
       0.529
ddpX-2
Peptidase M15D, vanX D-ala-D-ala dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.
       0.475
AGI24273.1
Hypothetical protein; COG0628 Predicted permease.
  
     0.474
AGI26154.1
Hypothetical protein; COG1694 Predicted pyrophosphatase.
       0.458
AGI25862.1
Type III effector HopPmaJ.
  
     0.453
cmoM
Hypothetical protein; Catalyzes the methylation of 5-carboxymethoxyuridine (cmo5U) to form 5-methoxycarbonylmethoxyuridine (mcmo5U) at position 34 in tRNAs; Belongs to the class I-like SAM-binding methyltransferase superfamily. CmoM family.
       0.444
AGI26025.1
Hypothetical protein.
  
     0.420
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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