STRINGSTRING
AGI26158.1 AGI26158.1 AGI26159.1 AGI26159.1 AGI26157.1 AGI26157.1 AGI26156.1 AGI26156.1 AGI26160.1 AGI26160.1 AGI24230.1 AGI24230.1 AGI24480.1 AGI24480.1 ddpX-2 ddpX-2 AGI24231.1 AGI24231.1 AGI26154.1 AGI26154.1 cmoM cmoM
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI26158.1GNAT family acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. (164 aa)    
Predicted Functional Partners:
AGI26159.1
Hypothetical protein; COG2044 Predicted peroxiredoxins.
 
     0.868
AGI26157.1
Lipoprotein.
       0.772
AGI26156.1
Hypothetical protein.
 
     0.643
AGI26160.1
COG0509 Glycine cleavage system H protein (lipoate-binding).
 
     0.612
AGI24230.1
Hypothetical protein.
  
     0.544
AGI24480.1
L-ornithine N5-oxygenase; COG3486 Lysine/ornithine N-monooxygenase.
 
  
 0.531
ddpX-2
Peptidase M15D, vanX D-ala-D-ala dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.
       0.493
AGI24231.1
Hypothetical protein.
  
     0.463
AGI26154.1
Hypothetical protein; COG1694 Predicted pyrophosphatase.
       0.454
cmoM
Hypothetical protein; Catalyzes the methylation of 5-carboxymethoxyuridine (cmo5U) to form 5-methoxycarbonylmethoxyuridine (mcmo5U) at position 34 in tRNAs; Belongs to the class I-like SAM-binding methyltransferase superfamily. CmoM family.
       0.454
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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