STRINGSTRING
selA selA selD selD AGI26171.1 AGI26171.1 serS serS fdhE fdhE AGI26175.1 AGI26175.1 AGI26176.1 AGI26176.1 AGI26177.1 AGI26177.1 AGI26174.1 AGI26174.1 trkA trkA AGI23412.1 AGI23412.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
selASelenocysteine synthase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis. (468 aa)    
Predicted Functional Partners:
selD
Selenophosphate synthetase; Synthesizes selenophosphate from selenide and ATP.
 
  
 0.985
AGI26171.1
COG3276 Selenocysteine-specific translation elongation factor.
 
  
 0.972
serS
seryl-tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
    
 0.936
fdhE
Formate dehydrogenase accessory protein FdhE; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.
 
   
 0.900
AGI26175.1
Nitrate-inducible formate dehydrogenase subunit beta; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers.
 
  
 0.866
AGI26176.1
Formate dehydrogenase-O, major subunit; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.857
AGI26177.1
Twin-arginine translocation pathway signal; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
 
  
 0.846
AGI26174.1
COG2864 Cytochrome b subunit of formate dehydrogenase.
 
  
 0.838
trkA
Potassium transporter peripheral membrane component; COG0569 K+ transport systems, NAD-binding component.
  
    0.601
AGI23412.1
Hypothetical protein; COG2391 Predicted transporter component.
 
  
 0.445
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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