STRINGSTRING
AGI26351.1 AGI26351.1 AGI26623.1 AGI26623.1 AGI26353.1 AGI26353.1 AGI26352.1 AGI26352.1 AGI26350.1 AGI26350.1 AGI26631.1 AGI26631.1 AGI25763.1 AGI25763.1 AGI21999.1 AGI21999.1 AGI26521.1 AGI26521.1 AGI26622.1 AGI26622.1 AGI26524.1 AGI26524.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
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[Homology]
Score
AGI26351.1COG0463 Glycosyltransferases involved in cell wall biogenesis. (293 aa)    
Predicted Functional Partners:
AGI26623.1
COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.902
AGI26353.1
Lipopolysaccharide core biosynthesis protein.
  
    0.771
AGI26352.1
Hypothetical protein; COG0438 Glycosyltransferase.
  
  
 0.768
AGI26350.1
O-antigen polymerase.
  
  
 0.766
AGI26631.1
Tyrosine-protein kinase; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
  
 0.718
AGI25763.1
Phosphomannose isomerase / guanosine 5'-diphospho-D-mannose pyrophosphorylase; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.702
AGI21999.1
Phosphomannose isomerase/GDP-mannose WbpW; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.699
AGI26521.1
COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.639
AGI26622.1
COG1596 Periplasmic protein involved in polysaccharide export.
 
  
 0.625
AGI26524.1
COG1088 dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.617
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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