STRINGSTRING
AGI26379.1 AGI26379.1 AGI26378.1 AGI26378.1 AGI26377.1 AGI26377.1 AGI24006.1 AGI24006.1 AGI25123.1 AGI25123.1 AGI25523.1 AGI25523.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI26379.1COG0589 Universal stress protein UspA and related nucleotide-binding proteins. (268 aa)    
Predicted Functional Partners:
AGI26378.1
COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
 
     0.649
AGI26377.1
Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
 
 0.522
AGI24006.1
Major porin and structural outer membrane porin OprF precursor; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
 
  
 0.480
AGI25123.1
COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
  
  
 0.441
AGI25523.1
COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
  
  
 0.434
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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