STRINGSTRING
AGI26405.1 AGI26405.1 metK metK AGI25115.1 AGI25115.1 AGI25911.1 AGI25911.1 AGI26667.1 AGI26667.1 AGI25838.1 AGI25838.1 AGI25791.1 AGI25791.1 AGI25337.1 AGI25337.1 AGI22020.1 AGI22020.1 AGI22729.1 AGI22729.1 AGI23141.1 AGI23141.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI26405.1COG0640 Predicted transcriptional regulators. (333 aa)    
Predicted Functional Partners:
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
  
 0.838
AGI25115.1
Hypothetical protein.
  
     0.745
AGI25911.1
Hypothetical protein.
  
     0.742
AGI26667.1
Hypothetical protein.
  
     0.721
AGI25838.1
COG3141 Uncharacterized protein conserved in bacteria.
  
     0.708
AGI25791.1
COG3141 Uncharacterized protein conserved in bacteria.
  
     0.701
AGI25337.1
Hypothetical protein.
  
     0.696
AGI22020.1
Hypothetical protein.
  
     0.692
AGI22729.1
Heavy metal translocating P-type ATPase; COG2217 Cation transport ATPase.
  
  
 0.628
AGI23141.1
Heavy metal translocating p-type ATPase; COG2217 Cation transport ATPase.
  
  
 0.628
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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