STRINGSTRING
AGI26413.1 AGI26413.1 AGI26412.1 AGI26412.1 AGI26414.1 AGI26414.1 AGI24000.1 AGI24000.1 AGI26725.1 AGI26725.1 AGI25353.1 AGI25353.1 AGI22534.1 AGI22534.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI26413.1COG3686 Predicted membrane protein. (128 aa)    
Predicted Functional Partners:
AGI26412.1
COG3909 Cytochrome c556.
 
    0.642
AGI26414.1
Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
       0.539
AGI24000.1
Lipase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
    0.502
AGI26725.1
Hypothetical protein.
  
     0.459
AGI25353.1
Patatin; COG1752 Predicted esterase of the alpha-beta hydrolase superfamily.
  
     0.424
AGI22534.1
Hypothetical protein; COG3315 O-Methyltransferase involved in polyketide biosynthesis.
  
     0.400
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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