Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI25587.1 | AGI26440.1 | H681_18600 | H681_22865 | Histidine utilization repressor; COG2188 Transcriptional regulators. | COG3741 N-formylglutamate amidohydrolase. | 0.605 |
AGI25587.1 | AGI26442.1 | H681_18600 | H681_22875 | Histidine utilization repressor; COG2188 Transcriptional regulators. | Putative histidine/phenylalanine ammonia-lyase; COG2986 Histidine ammonia-lyase. | 0.497 |
AGI25587.1 | AGI26451.1 | H681_18600 | H681_22920 | Histidine utilization repressor; COG2188 Transcriptional regulators. | N-formimino-L-glutamate deiminase; COG0402 Cytosine deaminase and related metal-dependent hydrolases. | 0.791 |
AGI25587.1 | hutH | H681_18600 | H681_22905 | Histidine utilization repressor; COG2188 Transcriptional regulators. | COG2986 Histidine ammonia-lyase. | 0.610 |
AGI25587.1 | hutI | H681_18600 | H681_22870 | Histidine utilization repressor; COG2188 Transcriptional regulators. | COG1228 Imidazolonepropionase and related amidohydrolases. | 0.720 |
AGI25587.1 | hutU | H681_18600 | H681_18595 | Histidine utilization repressor; COG2188 Transcriptional regulators. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.778 |
AGI25587.1 | hutU-2 | H681_18600 | H681_22900 | Histidine utilization repressor; COG2188 Transcriptional regulators. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.653 |
AGI26440.1 | AGI25587.1 | H681_22865 | H681_18600 | COG3741 N-formylglutamate amidohydrolase. | Histidine utilization repressor; COG2188 Transcriptional regulators. | 0.605 |
AGI26440.1 | AGI26442.1 | H681_22865 | H681_22875 | COG3741 N-formylglutamate amidohydrolase. | Putative histidine/phenylalanine ammonia-lyase; COG2986 Histidine ammonia-lyase. | 0.774 |
AGI26440.1 | AGI26443.1 | H681_22865 | H681_22880 | COG3741 N-formylglutamate amidohydrolase. | ABC transporter ATP-binding protein; COG4175 ABC-type proline/glycine betaine transport system, ATPase component. | 0.634 |
AGI26440.1 | AGI26444.1 | H681_22865 | H681_22885 | COG3741 N-formylglutamate amidohydrolase. | COG4176 ABC-type proline/glycine betaine transport system, permease component. | 0.803 |
AGI26440.1 | AGI26450.1 | H681_22865 | H681_22915 | COG3741 N-formylglutamate amidohydrolase. | Histidine utilization repressor; COG2188 Transcriptional regulators. | 0.450 |
AGI26440.1 | AGI26451.1 | H681_22865 | H681_22920 | COG3741 N-formylglutamate amidohydrolase. | N-formimino-L-glutamate deiminase; COG0402 Cytosine deaminase and related metal-dependent hydrolases. | 0.984 |
AGI26440.1 | hutH | H681_22865 | H681_22905 | COG3741 N-formylglutamate amidohydrolase. | COG2986 Histidine ammonia-lyase. | 0.586 |
AGI26440.1 | hutI | H681_22865 | H681_22870 | COG3741 N-formylglutamate amidohydrolase. | COG1228 Imidazolonepropionase and related amidohydrolases. | 0.918 |
AGI26440.1 | hutU | H681_22865 | H681_18595 | COG3741 N-formylglutamate amidohydrolase. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.631 |
AGI26440.1 | hutU-2 | H681_22865 | H681_22900 | COG3741 N-formylglutamate amidohydrolase. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.686 |
AGI26442.1 | AGI25587.1 | H681_22875 | H681_18600 | Putative histidine/phenylalanine ammonia-lyase; COG2986 Histidine ammonia-lyase. | Histidine utilization repressor; COG2188 Transcriptional regulators. | 0.497 |
AGI26442.1 | AGI26440.1 | H681_22875 | H681_22865 | Putative histidine/phenylalanine ammonia-lyase; COG2986 Histidine ammonia-lyase. | COG3741 N-formylglutamate amidohydrolase. | 0.774 |
AGI26442.1 | AGI26443.1 | H681_22875 | H681_22880 | Putative histidine/phenylalanine ammonia-lyase; COG2986 Histidine ammonia-lyase. | ABC transporter ATP-binding protein; COG4175 ABC-type proline/glycine betaine transport system, ATPase component. | 0.697 |
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