Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI22285.1 | AGI22606.1 | H681_02015 | H681_03620 | Poly(hydroxyalkanoate) granule-associated protein. | Hypothetical protein. | 0.599 |
AGI22285.1 | AGI23176.1 | H681_02015 | H681_06500 | Poly(hydroxyalkanoate) granule-associated protein. | Transferase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | 0.571 |
AGI22285.1 | AGI23622.1 | H681_02015 | H681_08740 | Poly(hydroxyalkanoate) granule-associated protein. | COG5581 Predicted glycosyltransferase. | 0.446 |
AGI22285.1 | AGI26030.1 | H681_02015 | H681_20815 | Poly(hydroxyalkanoate) granule-associated protein. | Hypothetical protein. | 0.570 |
AGI22285.1 | AGI26031.1 | H681_02015 | H681_20820 | Poly(hydroxyalkanoate) granule-associated protein. | Hypothetical protein. | 0.585 |
AGI22285.1 | AGI26032.1 | H681_02015 | H681_20825 | Poly(hydroxyalkanoate) granule-associated protein. | Hypothetical protein; COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases). | 0.573 |
AGI22285.1 | AGI26307.1 | H681_02015 | H681_22200 | Poly(hydroxyalkanoate) granule-associated protein. | HDOD domain-contain protein. | 0.571 |
AGI22285.1 | AGI26455.1 | H681_02015 | H681_22940 | Poly(hydroxyalkanoate) granule-associated protein. | Esterase EstA; COG3240 Phospholipase/lecithinase/hemolysin. | 0.725 |
AGI22606.1 | AGI22285.1 | H681_03620 | H681_02015 | Hypothetical protein. | Poly(hydroxyalkanoate) granule-associated protein. | 0.599 |
AGI22606.1 | AGI23176.1 | H681_03620 | H681_06500 | Hypothetical protein. | Transferase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | 0.732 |
AGI22606.1 | AGI23622.1 | H681_03620 | H681_08740 | Hypothetical protein. | COG5581 Predicted glycosyltransferase. | 0.632 |
AGI22606.1 | AGI26030.1 | H681_03620 | H681_20815 | Hypothetical protein. | Hypothetical protein. | 0.675 |
AGI22606.1 | AGI26031.1 | H681_03620 | H681_20820 | Hypothetical protein. | Hypothetical protein. | 0.682 |
AGI22606.1 | AGI26032.1 | H681_03620 | H681_20825 | Hypothetical protein. | Hypothetical protein; COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases). | 0.674 |
AGI22606.1 | AGI26307.1 | H681_03620 | H681_22200 | Hypothetical protein. | HDOD domain-contain protein. | 0.738 |
AGI22606.1 | AGI26455.1 | H681_03620 | H681_22940 | Hypothetical protein. | Esterase EstA; COG3240 Phospholipase/lecithinase/hemolysin. | 0.630 |
AGI23176.1 | AGI22285.1 | H681_06500 | H681_02015 | Transferase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | Poly(hydroxyalkanoate) granule-associated protein. | 0.571 |
AGI23176.1 | AGI22606.1 | H681_06500 | H681_03620 | Transferase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | Hypothetical protein. | 0.732 |
AGI23176.1 | AGI23622.1 | H681_06500 | H681_08740 | Transferase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | COG5581 Predicted glycosyltransferase. | 0.732 |
AGI23176.1 | AGI26030.1 | H681_06500 | H681_20815 | Transferase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | Hypothetical protein. | 0.666 |
page 1 of 4