STRINGSTRING
AGI26586.1 AGI26586.1 AGI23038.1 AGI23038.1 AGI23037.1 AGI23037.1 AGI26360.1 AGI26360.1 AGI26362.1 AGI26362.1 AGI26359.1 AGI26359.1 AGI23944.1 AGI23944.1 AGI26363.1 AGI26363.1 AGI26361.1 AGI26361.1 AGI26358.1 AGI26358.1 AGI22966.1 AGI22966.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI26586.1Putative transcriptional regulator; COG3204 Uncharacterized protein conserved in bacteria. (324 aa)    
Predicted Functional Partners:
AGI23038.1
Lipopolysaccharide kinase InaA.
 
   
 0.777
AGI23037.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
  
   
 0.770
AGI26360.1
Putative lipopolysaccharide biosynthesis-like protein; COG3642 Mn2+-dependent serine/threonine protein kinase.
 
   
 0.766
AGI26362.1
Lipopolysaccharide core heptose(I) kinase RfaP; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family.
  
     0.760
AGI26359.1
COG0515 Serine/threonine protein kinase.
  
     0.758
AGI23944.1
Hypothetical protein; COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily.
  
     0.745
AGI26363.1
COG0438 Glycosyltransferase.
  
     0.733
AGI26361.1
COG0515 Serine/threonine protein kinase.
  
     0.727
AGI26358.1
Carbamoyltransferase; COG2192 Predicted carbamoyl transferase, NodU family.
 
     0.694
AGI22966.1
Anti-sigma-factor antagonist.
  
     0.608
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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