Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI22152.1 | AGI24775.1 | H681_01350 | H681_14525 | Sterol desaturase-like protein; COG3000 Sterol desaturase. | Fatty acid hydroxylase; COG3000 Sterol desaturase. | 0.520 |
AGI22152.1 | AGI26602.1 | H681_01350 | H681_23675 | Sterol desaturase-like protein; COG3000 Sterol desaturase. | COG3751 Predicted proline hydroxylase. | 0.407 |
AGI22435.1 | AGI26602.1 | H681_02765 | H681_23675 | Elongation factor Tu; COG0050 GTPases - translation elongation factors. | COG3751 Predicted proline hydroxylase. | 0.587 |
AGI24775.1 | AGI22152.1 | H681_14525 | H681_01350 | Fatty acid hydroxylase; COG3000 Sterol desaturase. | Sterol desaturase-like protein; COG3000 Sterol desaturase. | 0.520 |
AGI24775.1 | AGI26602.1 | H681_14525 | H681_23675 | Fatty acid hydroxylase; COG3000 Sterol desaturase. | COG3751 Predicted proline hydroxylase. | 0.407 |
AGI26602.1 | AGI22152.1 | H681_23675 | H681_01350 | COG3751 Predicted proline hydroxylase. | Sterol desaturase-like protein; COG3000 Sterol desaturase. | 0.407 |
AGI26602.1 | AGI22435.1 | H681_23675 | H681_02765 | COG3751 Predicted proline hydroxylase. | Elongation factor Tu; COG0050 GTPases - translation elongation factors. | 0.587 |
AGI26602.1 | AGI24775.1 | H681_23675 | H681_14525 | COG3751 Predicted proline hydroxylase. | Fatty acid hydroxylase; COG3000 Sterol desaturase. | 0.407 |
AGI26602.1 | AGI26603.1 | H681_23675 | H681_23680 | COG3751 Predicted proline hydroxylase. | Hypothetical protein. | 0.523 |
AGI26602.1 | hemF | H681_23675 | H681_00330 | COG3751 Predicted proline hydroxylase. | Coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX. | 0.495 |
AGI26602.1 | tuf | H681_23675 | H681_02705 | COG3751 Predicted proline hydroxylase. | Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.587 |
AGI26603.1 | AGI26602.1 | H681_23680 | H681_23675 | Hypothetical protein. | COG3751 Predicted proline hydroxylase. | 0.523 |
hemF | AGI26602.1 | H681_00330 | H681_23675 | Coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX. | COG3751 Predicted proline hydroxylase. | 0.495 |
tuf | AGI26602.1 | H681_02705 | H681_23675 | Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | COG3751 Predicted proline hydroxylase. | 0.587 |