Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI22358.1 | AGI23620.1 | H681_02380 | H681_08730 | Hypothetical protein; COG0665 Glycine/D-amino acid oxidases (deaminating). | Hypothetical protein; COG0174 Glutamine synthetase. | 0.732 |
AGI22358.1 | AGI24266.1 | H681_02380 | H681_11980 | Hypothetical protein; COG0665 Glycine/D-amino acid oxidases (deaminating). | COG0174 Glutamine synthetase. | 0.787 |
AGI22358.1 | AGI26614.1 | H681_02380 | H681_23735 | Hypothetical protein; COG0665 Glycine/D-amino acid oxidases (deaminating). | Aminotransferase; COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.591 |
AGI22358.1 | AGI26615.1 | H681_02380 | H681_23740 | Hypothetical protein; COG0665 Glycine/D-amino acid oxidases (deaminating). | COG0174 Glutamine synthetase. | 0.789 |
AGI22358.1 | AGI26616.1 | H681_02380 | H681_23745 | Hypothetical protein; COG0665 Glycine/D-amino acid oxidases (deaminating). | COG2071 Predicted glutamine amidotransferases. | 0.655 |
AGI22358.1 | AGI26617.1 | H681_02380 | H681_23750 | Hypothetical protein; COG0665 Glycine/D-amino acid oxidases (deaminating). | COG0174 Glutamine synthetase. | 0.739 |
AGI23620.1 | AGI22358.1 | H681_08730 | H681_02380 | Hypothetical protein; COG0174 Glutamine synthetase. | Hypothetical protein; COG0665 Glycine/D-amino acid oxidases (deaminating). | 0.732 |
AGI23620.1 | AGI23784.1 | H681_08730 | H681_09550 | Hypothetical protein; COG0174 Glutamine synthetase. | Gamma-glutamylputrescine oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating). | 0.765 |
AGI23620.1 | AGI24264.1 | H681_08730 | H681_11970 | Hypothetical protein; COG0174 Glutamine synthetase. | FAD dependent oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating). | 0.751 |
AGI23620.1 | AGI24266.1 | H681_08730 | H681_11980 | Hypothetical protein; COG0174 Glutamine synthetase. | COG0174 Glutamine synthetase. | 0.650 |
AGI23620.1 | AGI24882.1 | H681_08730 | H681_15070 | Hypothetical protein; COG0174 Glutamine synthetase. | FAD dependent oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating). | 0.728 |
AGI23620.1 | AGI26614.1 | H681_08730 | H681_23735 | Hypothetical protein; COG0174 Glutamine synthetase. | Aminotransferase; COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.487 |
AGI23620.1 | AGI26615.1 | H681_08730 | H681_23740 | Hypothetical protein; COG0174 Glutamine synthetase. | COG0174 Glutamine synthetase. | 0.649 |
AGI23620.1 | AGI26616.1 | H681_08730 | H681_23745 | Hypothetical protein; COG0174 Glutamine synthetase. | COG2071 Predicted glutamine amidotransferases. | 0.595 |
AGI23620.1 | AGI26617.1 | H681_08730 | H681_23750 | Hypothetical protein; COG0174 Glutamine synthetase. | COG0174 Glutamine synthetase. | 0.700 |
AGI23620.1 | AGI26694.1 | H681_08730 | H681_24135 | Hypothetical protein; COG0174 Glutamine synthetase. | Oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating). | 0.757 |
AGI23784.1 | AGI23620.1 | H681_09550 | H681_08730 | Gamma-glutamylputrescine oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating). | Hypothetical protein; COG0174 Glutamine synthetase. | 0.765 |
AGI23784.1 | AGI24266.1 | H681_09550 | H681_11980 | Gamma-glutamylputrescine oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating). | COG0174 Glutamine synthetase. | 0.787 |
AGI23784.1 | AGI26614.1 | H681_09550 | H681_23735 | Gamma-glutamylputrescine oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating). | Aminotransferase; COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.511 |
AGI23784.1 | AGI26615.1 | H681_09550 | H681_23740 | Gamma-glutamylputrescine oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating). | COG0174 Glutamine synthetase. | 0.790 |
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