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AGI26660.1 AGI26660.1 cyaY cyaY AGI26658.1 AGI26658.1 AGI26661.1 AGI26661.1 lysA-2 lysA-2 dapF dapF AGI26657.1 AGI26657.1 AGI26664.1 AGI26664.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGI26660.1AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. (353 aa)    
Predicted Functional Partners:
cyaY
Frataxin-like protein; Involved in iron-sulfur (Fe-S) cluster assembly. May act as a regulator of Fe-S biogenesis.
       0.786
AGI26658.1
COG3313 Predicted Fe-S protein.
       0.778
AGI26661.1
Lipopeptide LppL.
       0.526
lysA-2
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
       0.522
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
       0.509
AGI26657.1
Nucleoside diphosphate kinase regulator; COG0782 Transcription elongation factor.
       0.476
AGI26664.1
COG3159 Uncharacterized protein conserved in bacteria.
       0.423
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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