STRINGSTRING
AGI26724.1 AGI26724.1 AGI23705.1 AGI23705.1 AGI26209.1 AGI26209.1 AGI23659.1 AGI23659.1 AGI22389.1 AGI22389.1 AGI22162.1 AGI22162.1 AGI23696.1 AGI23696.1 recG recG AGI26722.1 AGI26722.1 AGI23019.1 AGI23019.1 AGI26737.1 AGI26737.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI26724.1Hypothetical protein. (468 aa)    
Predicted Functional Partners:
AGI23705.1
Heme exporter protein CcmD; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family.
  
     0.739
AGI26209.1
Hypothetical protein.
  
     0.691
AGI23659.1
Two-component response regulator; COG0784 FOG: CheY-like receiver.
 
  
 0.679
AGI22389.1
Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.671
AGI22162.1
Flagellar basal body-associated protein FliL-like protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
     0.652
AGI23696.1
CheW domain-containing protein.
 
     0.643
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
     
 0.641
AGI26722.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.640
AGI23019.1
Two-component sensor; COG0642 Signal transduction histidine kinase.
 
     0.633
AGI26737.1
Two-component response regulator; COG0784 FOG: CheY-like receiver.
  
    0.624
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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