Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI22162.1 | AGI22389.1 | H681_01400 | H681_02535 | Flagellar basal body-associated protein FliL-like protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | 0.553 |
AGI22162.1 | AGI23659.1 | H681_01400 | H681_08925 | Flagellar basal body-associated protein FliL-like protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Two-component response regulator; COG0784 FOG: CheY-like receiver. | 0.641 |
AGI22162.1 | AGI23696.1 | H681_01400 | H681_09110 | Flagellar basal body-associated protein FliL-like protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | CheW domain-containing protein. | 0.837 |
AGI22162.1 | AGI26724.1 | H681_01400 | H681_24285 | Flagellar basal body-associated protein FliL-like protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Hypothetical protein. | 0.652 |
AGI22389.1 | AGI22162.1 | H681_02535 | H681_01400 | Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | Flagellar basal body-associated protein FliL-like protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.553 |
AGI22389.1 | AGI23659.1 | H681_02535 | H681_08925 | Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | Two-component response regulator; COG0784 FOG: CheY-like receiver. | 0.435 |
AGI22389.1 | AGI23696.1 | H681_02535 | H681_09110 | Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | CheW domain-containing protein. | 0.746 |
AGI22389.1 | AGI23705.1 | H681_02535 | H681_09155 | Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | Heme exporter protein CcmD; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family. | 0.527 |
AGI22389.1 | AGI26724.1 | H681_02535 | H681_24285 | Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | Hypothetical protein. | 0.671 |
AGI22389.1 | AGI26737.1 | H681_02535 | H681_24350 | Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | Two-component response regulator; COG0784 FOG: CheY-like receiver. | 0.735 |
AGI23019.1 | AGI23659.1 | H681_05695 | H681_08925 | Two-component sensor; COG0642 Signal transduction histidine kinase. | Two-component response regulator; COG0784 FOG: CheY-like receiver. | 0.708 |
AGI23019.1 | AGI23705.1 | H681_05695 | H681_09155 | Two-component sensor; COG0642 Signal transduction histidine kinase. | Heme exporter protein CcmD; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family. | 0.468 |
AGI23019.1 | AGI26209.1 | H681_05695 | H681_21710 | Two-component sensor; COG0642 Signal transduction histidine kinase. | Hypothetical protein. | 0.463 |
AGI23019.1 | AGI26724.1 | H681_05695 | H681_24285 | Two-component sensor; COG0642 Signal transduction histidine kinase. | Hypothetical protein. | 0.633 |
AGI23019.1 | AGI26737.1 | H681_05695 | H681_24350 | Two-component sensor; COG0642 Signal transduction histidine kinase. | Two-component response regulator; COG0784 FOG: CheY-like receiver. | 0.557 |
AGI23659.1 | AGI22162.1 | H681_08925 | H681_01400 | Two-component response regulator; COG0784 FOG: CheY-like receiver. | Flagellar basal body-associated protein FliL-like protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.641 |
AGI23659.1 | AGI22389.1 | H681_08925 | H681_02535 | Two-component response regulator; COG0784 FOG: CheY-like receiver. | Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). | 0.435 |
AGI23659.1 | AGI23019.1 | H681_08925 | H681_05695 | Two-component response regulator; COG0784 FOG: CheY-like receiver. | Two-component sensor; COG0642 Signal transduction histidine kinase. | 0.708 |
AGI23659.1 | AGI23696.1 | H681_08925 | H681_09110 | Two-component response regulator; COG0784 FOG: CheY-like receiver. | CheW domain-containing protein. | 0.677 |
AGI23659.1 | AGI26209.1 | H681_08925 | H681_21710 | Two-component response regulator; COG0784 FOG: CheY-like receiver. | Hypothetical protein. | 0.484 |
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