Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGI24008.1 | AGI24009.1 | H681_10680 | H681_10685 | Assimilatory nitrate reductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | 0.992 |
| AGI24008.1 | AGI24766.1 | H681_10680 | H681_14480 | Assimilatory nitrate reductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | 0.594 |
| AGI24008.1 | AGI26727.1 | H681_10680 | H681_24300 | Assimilatory nitrate reductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Putative rubredoxin reductase; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the FAD-dependent oxidoreductase family. | 0.642 |
| AGI24008.1 | AGI26728.1 | H681_10680 | H681_24305 | Assimilatory nitrate reductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | COG1773 Rubredoxin. | 0.548 |
| AGI24008.1 | AGI26729.1 | H681_10680 | H681_24310 | Assimilatory nitrate reductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | COG1773 Rubredoxin. | 0.548 |
| AGI24008.1 | gltB | H681_10680 | H681_22595 | Assimilatory nitrate reductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | COG0067 Glutamate synthase domain 1. | 0.450 |
| AGI24008.1 | hmp | H681_10680 | H681_13865 | Assimilatory nitrate reductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily. | 0.512 |
| AGI24009.1 | AGI24008.1 | H681_10685 | H681_10680 | COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | Assimilatory nitrate reductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.992 |
| AGI24009.1 | AGI24418.1 | H681_10685 | H681_12740 | COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | Rieske (2Fe-2S) domain-containing protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | 0.665 |
| AGI24009.1 | AGI26727.1 | H681_10685 | H681_24300 | COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | Putative rubredoxin reductase; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the FAD-dependent oxidoreductase family. | 0.729 |
| AGI24009.1 | AGI26728.1 | H681_10685 | H681_24305 | COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | COG1773 Rubredoxin. | 0.729 |
| AGI24009.1 | AGI26729.1 | H681_10685 | H681_24310 | COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | COG1773 Rubredoxin. | 0.729 |
| AGI24009.1 | cysG | H681_10685 | H681_13625 | COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | 0.778 |
| AGI24009.1 | gltB | H681_10685 | H681_22595 | COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | COG0067 Glutamate synthase domain 1. | 0.458 |
| AGI24418.1 | AGI24009.1 | H681_12740 | H681_10685 | Rieske (2Fe-2S) domain-containing protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | 0.665 |
| AGI24418.1 | AGI24766.1 | H681_12740 | H681_14480 | Rieske (2Fe-2S) domain-containing protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | 0.968 |
| AGI24418.1 | AGI26727.1 | H681_12740 | H681_24300 | Rieske (2Fe-2S) domain-containing protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | Putative rubredoxin reductase; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the FAD-dependent oxidoreductase family. | 0.635 |
| AGI24418.1 | AGI26728.1 | H681_12740 | H681_24305 | Rieske (2Fe-2S) domain-containing protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | COG1773 Rubredoxin. | 0.729 |
| AGI24418.1 | AGI26729.1 | H681_12740 | H681_24310 | Rieske (2Fe-2S) domain-containing protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | COG1773 Rubredoxin. | 0.729 |
| AGI24418.1 | cysG | H681_12740 | H681_13625 | Rieske (2Fe-2S) domain-containing protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | 0.778 |
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