Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI24009.1 | AGI24418.1 | H681_10685 | H681_12740 | COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | Rieske (2Fe-2S) domain-containing protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | 0.665 |
AGI24009.1 | AGI26727.1 | H681_10685 | H681_24300 | COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | Putative rubredoxin reductase; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the FAD-dependent oxidoreductase family. | 0.729 |
AGI24009.1 | AGI26728.1 | H681_10685 | H681_24305 | COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | COG1773 Rubredoxin. | 0.729 |
AGI24009.1 | AGI26729.1 | H681_10685 | H681_24310 | COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | COG1773 Rubredoxin. | 0.729 |
AGI24009.1 | cysG | H681_10685 | H681_13625 | COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | 0.778 |
AGI24009.1 | gltB | H681_10685 | H681_22595 | COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | COG0067 Glutamate synthase domain 1. | 0.458 |
AGI24418.1 | AGI24009.1 | H681_12740 | H681_10685 | Rieske (2Fe-2S) domain-containing protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | 0.665 |
AGI24418.1 | AGI24766.1 | H681_12740 | H681_14480 | Rieske (2Fe-2S) domain-containing protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | 0.968 |
AGI24418.1 | AGI26727.1 | H681_12740 | H681_24300 | Rieske (2Fe-2S) domain-containing protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | Putative rubredoxin reductase; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the FAD-dependent oxidoreductase family. | 0.635 |
AGI24418.1 | AGI26728.1 | H681_12740 | H681_24305 | Rieske (2Fe-2S) domain-containing protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | COG1773 Rubredoxin. | 0.729 |
AGI24418.1 | AGI26729.1 | H681_12740 | H681_24310 | Rieske (2Fe-2S) domain-containing protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | COG1773 Rubredoxin. | 0.729 |
AGI24418.1 | cysG | H681_12740 | H681_13625 | Rieske (2Fe-2S) domain-containing protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | 0.778 |
AGI24418.1 | gltB | H681_12740 | H681_22595 | Rieske (2Fe-2S) domain-containing protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | COG0067 Glutamate synthase domain 1. | 0.458 |
AGI24766.1 | AGI24418.1 | H681_14480 | H681_12740 | COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | Rieske (2Fe-2S) domain-containing protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | 0.968 |
AGI24766.1 | AGI26727.1 | H681_14480 | H681_24300 | COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | Putative rubredoxin reductase; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the FAD-dependent oxidoreductase family. | 0.691 |
AGI24766.1 | AGI26728.1 | H681_14480 | H681_24305 | COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | COG1773 Rubredoxin. | 0.729 |
AGI24766.1 | AGI26729.1 | H681_14480 | H681_24310 | COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | COG1773 Rubredoxin. | 0.729 |
AGI24766.1 | cysG | H681_14480 | H681_13625 | COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | 0.778 |
AGI24766.1 | gltB | H681_14480 | H681_22595 | COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. | COG0067 Glutamate synthase domain 1. | 0.458 |
AGI25953.1 | AGI26728.1 | H681_20430 | H681_24305 | COG0426 Uncharacterized flavoproteins. | COG1773 Rubredoxin. | 0.701 |
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