Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI22532.1 | AGI26735.1 | H681_03250 | H681_24340 | Hypothetical protein; COG0586 Uncharacterized membrane-associated protein. | COG1253 Hemolysins and related proteins containing CBS domains. | 0.578 |
AGI22532.1 | guaA | H681_03250 | H681_18770 | Hypothetical protein; COG0586 Uncharacterized membrane-associated protein. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.403 |
AGI26733.1 | AGI26734.1 | H681_24330 | H681_24335 | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | Phosphate regulon sensor histidine kinase, Classic; COG0642 Signal transduction histidine kinase. | 0.994 |
AGI26733.1 | AGI26735.1 | H681_24330 | H681_24340 | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | COG1253 Hemolysins and related proteins containing CBS domains. | 0.505 |
AGI26734.1 | AGI26733.1 | H681_24335 | H681_24330 | Phosphate regulon sensor histidine kinase, Classic; COG0642 Signal transduction histidine kinase. | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | 0.994 |
AGI26734.1 | AGI26735.1 | H681_24335 | H681_24340 | Phosphate regulon sensor histidine kinase, Classic; COG0642 Signal transduction histidine kinase. | COG1253 Hemolysins and related proteins containing CBS domains. | 0.600 |
AGI26735.1 | AGI22532.1 | H681_24340 | H681_03250 | COG1253 Hemolysins and related proteins containing CBS domains. | Hypothetical protein; COG0586 Uncharacterized membrane-associated protein. | 0.578 |
AGI26735.1 | AGI26733.1 | H681_24340 | H681_24330 | COG1253 Hemolysins and related proteins containing CBS domains. | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | 0.505 |
AGI26735.1 | AGI26734.1 | H681_24340 | H681_24335 | COG1253 Hemolysins and related proteins containing CBS domains. | Phosphate regulon sensor histidine kinase, Classic; COG0642 Signal transduction histidine kinase. | 0.600 |
AGI26735.1 | guaA | H681_24340 | H681_18770 | COG1253 Hemolysins and related proteins containing CBS domains. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.537 |
AGI26735.1 | ybeY | H681_24340 | H681_03400 | COG1253 Hemolysins and related proteins containing CBS domains. | Metal-binding heat shock protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.425 |
guaA | AGI22532.1 | H681_18770 | H681_03250 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Hypothetical protein; COG0586 Uncharacterized membrane-associated protein. | 0.403 |
guaA | AGI26735.1 | H681_18770 | H681_24340 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | COG1253 Hemolysins and related proteins containing CBS domains. | 0.537 |
ybeY | AGI26735.1 | H681_03400 | H681_24340 | Metal-binding heat shock protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | COG1253 Hemolysins and related proteins containing CBS domains. | 0.425 |