STRINGSTRING
aspA aspA AGI24512.1 AGI24512.1 pckA pckA AGI23215.1 AGI23215.1 AGI23352.1 AGI23352.1 argH argH AGI24613.1 AGI24613.1 purA purA AGI25332.1 AGI25332.1 pyrB pyrB AGI25277.1 AGI25277.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aspACOG1027 Aspartate ammonia-lyase. (474 aa)    
Predicted Functional Partners:
AGI24512.1
COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D.
 
 
 0.971
pckA
Phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.
  
 
 0.923
AGI23215.1
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
   
 0.920
AGI23352.1
COG1794 Aspartate racemase; Belongs to the aspartate/glutamate racemases family.
    
 0.916
argH
COG0165 Argininosuccinate lyase.
     
0.913
AGI24613.1
COG0015 Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
     
 0.907
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
 0.907
AGI25332.1
COG0367 Asparagine synthase (glutamine-hydrolyzing).
     
 0.905
pyrB
COG0540 Aspartate carbamoyltransferase, catalytic chain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
     
  0.900
AGI25277.1
COG1448 Aspartate/tyrosine/aromatic aminotransferase.
     
  0.900
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.