STRINGSTRING
AGI26790.1 AGI26790.1 AGI26791.1 AGI26791.1 AGI26792.1 AGI26792.1 AGI22408.1 AGI22408.1 htpG htpG AGI21892.1 AGI21892.1 AGI26788.1 AGI26788.1 AGI26789.1 AGI26789.1 AGI25108.1 AGI25108.1 rapA rapA AGI25783.1 AGI25783.1
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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AGI26790.1Putative acetylpolyamine aminohydrolase; COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein. (370 aa)    
Predicted Functional Partners:
AGI26791.1
Permease, cytosine/purine, uracil, thiamine, allantoin family protein; COG1457 Purine-cytosine permease and related proteins; Belongs to the purine-cytosine permease (2.A.39) family.
       0.773
AGI26792.1
Hypothetical protein; COG0687 Spermidine/putrescine-binding periplasmic protein.
  
    0.568
AGI22408.1
COG0464 ATPases of the AAA+ class.
   
 0.522
htpG
Heat shock protein 90; Molecular chaperone. Has ATPase activity.
   
 0.512
AGI21892.1
helicase/SNF2 family domain protein; COG0553 Superfamily II DNA/RNA helicases, SNF2 family.
  
 
 0.507
AGI26788.1
COG1960 Acyl-CoA dehydrogenases.
       0.474
AGI26789.1
COG1960 Acyl-CoA dehydrogenases.
       0.474
AGI25108.1
Non-specific serine/threonine protein kinase.
    
 0.443
rapA
ATP-dependent helicase HepA; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily.
    
 0.443
AGI25783.1
Helicase; COG0553 Superfamily II DNA/RNA helicases, SNF2 family.
    
 0.443
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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