STRINGSTRING
AGI26796.1 AGI26796.1 AGI22029.1 AGI22029.1 AGI22027.1 AGI22027.1 AGI23505.1 AGI23505.1 AGI22028.1 AGI22028.1 AGI24883.1 AGI24883.1 AGI21985.1 AGI21985.1 AGI21953.1 AGI21953.1 AGI22781.1 AGI22781.1 AGI24706.1 AGI24706.1 AGI26680.1 AGI26680.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI26796.1COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (302 aa)    
Predicted Functional Partners:
AGI22029.1
COG2072 Predicted flavoprotein involved in K+ transport.
 
     0.739
AGI22027.1
Hypothetical protein.
 
     0.734
AGI23505.1
Protein GbuR; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.706
AGI22028.1
COG0251 Putative translation initiation inhibitor, yjgF family.
 
     0.701
AGI24883.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.612
AGI21985.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
    0.603
AGI21953.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.601
AGI22781.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.576
AGI24706.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.575
AGI26680.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.575
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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