STRINGSTRING
AGI26803.1 AGI26803.1 AGI24790.1 AGI24790.1 AGI25007.1 AGI25007.1 AGI24166.1 AGI24166.1 AGI22781.1 AGI22781.1 AGI24769.1 AGI24769.1 AGI23587.1 AGI23587.1 AGI26802.1 AGI26802.1 AGI26801.1 AGI26801.1 AGI24830.1 AGI24830.1 AGI23356.1 AGI23356.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI26803.1COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (316 aa)    
Predicted Functional Partners:
AGI24790.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.765
AGI25007.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.667
AGI24166.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.653
AGI22781.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.642
AGI24769.1
Transcriptional Regulator, LysR family; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.568
AGI23587.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
   
 0.555
AGI26802.1
COG0439 Biotin carboxylase.
       0.545
AGI26801.1
COG5016 Pyruvate/oxaloacetate carboxyltransferase.
       0.539
AGI24830.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.537
AGI23356.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.524
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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