STRINGSTRING
AGI26809.1 AGI26809.1 AGI26808.1 AGI26808.1 tolB tolB AGI25094.1 AGI25094.1 AGI26810.1 AGI26810.1 rlpA rlpA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI26809.1Hypothetical protein. (723 aa)    
Predicted Functional Partners:
AGI26808.1
Hypothetical protein; COG0178 Excinuclease ATPase subunit.
       0.800
tolB
Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
  
 0.653
AGI25094.1
DNA internalization-related competence protein ComEC/Rec2; COG0658 Predicted membrane metal-binding protein.
     
 0.497
AGI26810.1
Copper-containing nitrite reductase; COG2132 Putative multicopper oxidases; Belongs to the multicopper oxidase family.
       0.458
rlpA
Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
  
 
 0.446
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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