STRINGSTRING
AGI26835.1 AGI26835.1 AGI24942.1 AGI24942.1 AGI24945.1 AGI24945.1 AGI24932.1 AGI24932.1 AGI23873.1 AGI23873.1 AGI23556.1 AGI23556.1 AGI26836.1 AGI26836.1 AGI26104.1 AGI26104.1 AGI26837.1 AGI26837.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI26835.1COG1802 Transcriptional regulators. (221 aa)    
Predicted Functional Partners:
AGI24942.1
COG2186 Transcriptional regulators.
 
  
 0.756
AGI24945.1
COG1802 Transcriptional regulators.
  
     0.741
AGI24932.1
COG1802 Transcriptional regulators.
  
     0.694
AGI23873.1
COG2186 Transcriptional regulators.
 
  
 0.658
AGI23556.1
COG2186 Transcriptional regulators.
 
  
 0.629
AGI26836.1
Putative short-chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
       0.584
AGI26104.1
Pyruvate dehydrogenase complex repressor; COG2186 Transcriptional regulators.
 
  
 0.572
AGI26837.1
Aminotransferase; COG0001 Glutamate-1-semialdehyde aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.434
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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