Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGI22714.1 | AGI22722.1 | H681_04160 | H681_04200 | Two-component sensor; COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system. | Multi-sensor hybrid histidine kinase; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. | 0.635 |
| AGI22714.1 | AGI26529.1 | H681_04160 | H681_23310 | Two-component sensor; COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system. | COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.665 |
| AGI22714.1 | AGI26847.1 | H681_04160 | H681_24900 | Two-component sensor; COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system. | COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.677 |
| AGI22722.1 | AGI22714.1 | H681_04200 | H681_04160 | Multi-sensor hybrid histidine kinase; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. | Two-component sensor; COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system. | 0.635 |
| AGI22722.1 | AGI22956.1 | H681_04200 | H681_05380 | Multi-sensor hybrid histidine kinase; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.470 |
| AGI22722.1 | AGI23056.1 | H681_04200 | H681_05880 | Multi-sensor hybrid histidine kinase; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. | Sensory box histidine kinase; COG2202 FOG: PAS/PAC domain. | 0.940 |
| AGI22722.1 | AGI26464.1 | H681_04200 | H681_22985 | Multi-sensor hybrid histidine kinase; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. | Two-component sensor NtrB; COG3852 Signal transduction histidine kinase, nitrogen specific. | 0.550 |
| AGI22722.1 | AGI26528.1 | H681_04200 | H681_23305 | Multi-sensor hybrid histidine kinase; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. | Putative two-component sensor; COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system. | 0.655 |
| AGI22722.1 | AGI26529.1 | H681_04200 | H681_23310 | Multi-sensor hybrid histidine kinase; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. | COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.566 |
| AGI22722.1 | AGI26846.1 | H681_04200 | H681_24895 | Multi-sensor hybrid histidine kinase; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. | Putative two-component sensor; COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system. | 0.611 |
| AGI22722.1 | AGI26847.1 | H681_04200 | H681_24900 | Multi-sensor hybrid histidine kinase; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. | COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.579 |
| AGI22956.1 | AGI22722.1 | H681_05380 | H681_04200 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Multi-sensor hybrid histidine kinase; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. | 0.470 |
| AGI22956.1 | AGI23056.1 | H681_05380 | H681_05880 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Sensory box histidine kinase; COG2202 FOG: PAS/PAC domain. | 0.419 |
| AGI22956.1 | AGI26464.1 | H681_05380 | H681_22985 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Two-component sensor NtrB; COG3852 Signal transduction histidine kinase, nitrogen specific. | 0.559 |
| AGI22956.1 | AGI26529.1 | H681_05380 | H681_23310 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.778 |
| AGI22956.1 | AGI26847.1 | H681_05380 | H681_24900 | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.775 |
| AGI23056.1 | AGI22722.1 | H681_05880 | H681_04200 | Sensory box histidine kinase; COG2202 FOG: PAS/PAC domain. | Multi-sensor hybrid histidine kinase; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. | 0.940 |
| AGI23056.1 | AGI22956.1 | H681_05880 | H681_05380 | Sensory box histidine kinase; COG2202 FOG: PAS/PAC domain. | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.419 |
| AGI23056.1 | AGI26529.1 | H681_05880 | H681_23310 | Sensory box histidine kinase; COG2202 FOG: PAS/PAC domain. | COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.657 |
| AGI23056.1 | AGI26847.1 | H681_05880 | H681_24900 | Sensory box histidine kinase; COG2202 FOG: PAS/PAC domain. | COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.670 |
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