STRINGSTRING
AGI26858.1 AGI26858.1 AGI25215.1 AGI25215.1 AGI26623.1 AGI26623.1 AGI26859.1 AGI26859.1 AGI26860.1 AGI26860.1 AGI26631.1 AGI26631.1 AGI25386.1 AGI25386.1 AGI22359.1 AGI22359.1 AGI22737.1 AGI22737.1 AGI26857.1 AGI26857.1 ribB ribB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurrence
Coexpression
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[Homology]
Score
AGI26858.1COG1396 Predicted transcriptional regulators. (179 aa)    
Predicted Functional Partners:
AGI25215.1
DNA-binding protein; COG1396 Predicted transcriptional regulators.
  
   
 0.749
AGI26623.1
COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.717
AGI26859.1
Class II aldolase/adducin domain protein; COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.
 
  
 0.684
AGI26860.1
COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family.
 
     0.636
AGI26631.1
Tyrosine-protein kinase; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
  
  
 0.534
AGI25386.1
Putative two-component sensor; COG0591 Na+/proline symporter.
     
 0.507
AGI22359.1
Cupin; COG1396 Predicted transcriptional regulators.
 
 
0.458
AGI22737.1
Transcriptional regulator MmsR; COG2207 AraC-type DNA-binding domain-containing proteins.
 
 
 0.440
AGI26857.1
COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.436
ribB
Bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
     
 0.425
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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