STRINGSTRING
AGI26885.1 AGI26885.1 AGI26886.1 AGI26886.1 AGI26884.1 AGI26884.1 AGI26881.1 AGI26881.1 AGI22551.1 AGI22551.1 AGI23971.1 AGI23971.1 AGI25444.1 AGI25444.1 AGI23094.1 AGI23094.1 AGI22550.1 AGI22550.1 AGI26007.1 AGI26007.1 AGI23092.1 AGI23092.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI26885.1COG2831 Hemolysin activation/secretion protein. (302 aa)    
Predicted Functional Partners:
AGI26886.1
Hypothetical protein; COG2831 Hemolysin activation/secretion protein.
     0.980
AGI26884.1
Putative hemagglutinin; COG3210 Large exoproteins involved in heme utilization or adhesion.
 
 
 0.939
AGI26881.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.770
AGI22551.1
COG3539 P pilus assembly protein, pilin FimA.
  
  
 0.706
AGI23971.1
Hypothetical protein.
  
     0.626
AGI25444.1
Type IV pilus assembly PilZ.
  
     0.619
AGI23094.1
Usher; COG3188 P pilus assembly protein, porin PapC.
  
  
 0.613
AGI22550.1
Outer membrane usher protein; COG3188 P pilus assembly protein, porin PapC.
  
  
 0.611
AGI26007.1
Zonular occludens toxin.
  
     0.584
AGI23092.1
COG3121 P pilus assembly protein, chaperone PapD.
  
  
 0.543
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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