STRINGSTRING
AGI26908.1 AGI26908.1 AGI22544.1 AGI22544.1 pbpG pbpG AGI25368.1 AGI25368.1 AGI25926.1 AGI25926.1 gltP gltP AGI22374.1 AGI22374.1 AGI22022.1 AGI22022.1 dapB dapB AGI26282.1 AGI26282.1 dadX dadX
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGI26908.1COG2715 Uncharacterized membrane protein, required for spore maturation in B.subtilis. (409 aa)    
Predicted Functional Partners:
AGI22544.1
Serine-type D-Ala-D-Ala carboxypeptidase; COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
  
 0.690
pbpG
COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
  
 0.690
AGI25368.1
Peptidase M50, membrane-associated zinc metallopeptidase; COG0750 Predicted membrane-associated Zn-dependent proteases 1.
  
  
 0.687
AGI25926.1
COG1300 Uncharacterized membrane protein.
   
  
 0.620
gltP
Glutamate/aspartate:proton symporter; Catalyzes the proton-dependent transport of glutamate and aspartate; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. GltP subfamily.
       0.618
AGI22374.1
SpoVR family protein.
  
  
 0.550
AGI22022.1
COG1533 DNA repair photolyase.
     
 0.462
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
     
 0.456
AGI26282.1
Biosynthetic alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
     
 0.439
dadX
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
     
 0.439
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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