Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGI26930.1 | AGI26931.1 | H681_25315 | H681_25320 | parB-like partition protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family. | COG1192 ATPases involved in chromosome partitioning. | 0.979 |
| AGI26930.1 | atpB | H681_25315 | H681_25305 | parB-like partition protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family. | F0F1 ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | 0.521 |
| AGI26930.1 | gidB | H681_25315 | H681_25325 | parB-like partition protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family. | 16S rRNA methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. | 0.902 |
| AGI26930.1 | mnmG | H681_25315 | H681_25330 | parB-like partition protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family. | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.781 |
| AGI26930.1 | topA | H681_25315 | H681_16245 | parB-like partition protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family. | DNA topoisomerase I subunit omega; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus rem [...] | 0.536 |
| AGI26930.1 | trmE | H681_25315 | H681_25335 | parB-like partition protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family. | tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.550 |
| AGI26931.1 | AGI26930.1 | H681_25320 | H681_25315 | COG1192 ATPases involved in chromosome partitioning. | parB-like partition protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family. | 0.979 |
| AGI26931.1 | atpB | H681_25320 | H681_25305 | COG1192 ATPases involved in chromosome partitioning. | F0F1 ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | 0.507 |
| AGI26931.1 | gidB | H681_25320 | H681_25325 | COG1192 ATPases involved in chromosome partitioning. | 16S rRNA methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. | 0.835 |
| AGI26931.1 | mnmG | H681_25320 | H681_25330 | COG1192 ATPases involved in chromosome partitioning. | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.759 |
| AGI26931.1 | topA | H681_25320 | H681_16245 | COG1192 ATPases involved in chromosome partitioning. | DNA topoisomerase I subunit omega; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus rem [...] | 0.493 |
| atpB | AGI26930.1 | H681_25305 | H681_25315 | F0F1 ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | parB-like partition protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family. | 0.521 |
| atpB | AGI26931.1 | H681_25305 | H681_25320 | F0F1 ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | COG1192 ATPases involved in chromosome partitioning. | 0.507 |
| atpB | gidB | H681_25305 | H681_25325 | F0F1 ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | 16S rRNA methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. | 0.487 |
| atpB | mnmG | H681_25305 | H681_25330 | F0F1 ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.614 |
| atpB | rnpA | H681_25305 | H681_25350 | F0F1 ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.485 |
| atpB | yidC | H681_25305 | H681_25340 | F0F1 ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | Membrane protein insertase; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.612 |
| gidB | AGI26930.1 | H681_25325 | H681_25315 | 16S rRNA methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. | parB-like partition protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family. | 0.902 |
| gidB | AGI26931.1 | H681_25325 | H681_25320 | 16S rRNA methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. | COG1192 ATPases involved in chromosome partitioning. | 0.835 |
| gidB | atpB | H681_25325 | H681_25305 | 16S rRNA methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. | F0F1 ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | 0.487 |
page 1 of 4