STRINGSTRING
MDS_0014 MDS_0014 MDS_0015 MDS_0015 MDS_0013 MDS_0013 MDS_0016 MDS_0016 MDS_0017 MDS_0017 MDS_0018 MDS_0018 MDS_0012 MDS_0012 MDS_0021 MDS_0021 MDS_0020 MDS_0020 MDS_0019 MDS_0019 MDS_0025 MDS_0025
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_0014Hypothetical protein. (1166 aa)    
Predicted Functional Partners:
MDS_0015
Hypothetical protein.
 
 
 0.990
MDS_0013
Hypothetical protein.
 
  
 0.973
MDS_0016
Hypothetical protein.
 
  
 0.973
MDS_0017
Putative lipoprotein.
 
  
 0.971
MDS_0018
Hypothetical protein.
 
  
 0.964
MDS_0012
Ser/Thr protein phosphatase, putative.
 
  
 0.944
MDS_0021
Hypothetical protein.
 
  
 0.930
MDS_0020
Hypothetical protein.
 
  
 0.912
MDS_0019
Hypothetical protein.
 
  
 0.907
MDS_0025
Hypothetical protein.
 
  
 0.904
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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