STRINGSTRING
MDS_0019 MDS_0019 MDS_0020 MDS_0020 MDS_0022 MDS_0022 MDS_0027 MDS_0027 MDS_0029 MDS_0029 MDS_0021 MDS_0021 MDS_0015 MDS_0015 MDS_0017 MDS_0017 MDS_0018 MDS_0018 MDS_0025 MDS_0025 MDS_0026 MDS_0026
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_0019Hypothetical protein. (339 aa)    
Predicted Functional Partners:
MDS_0020
Hypothetical protein.
 
  
 0.985
MDS_0022
Hypothetical protein.
 
  
 0.978
MDS_0027
Hypothetical protein.
 
  
 0.978
MDS_0029
Rhs-family protein.
 
  
 0.974
MDS_0021
Hypothetical protein.
 
  
 0.964
MDS_0015
Hypothetical protein.
 
  
 0.943
MDS_0017
Putative lipoprotein.
 
  
 0.921
MDS_0018
Hypothetical protein.
 
  
 0.921
MDS_0025
Hypothetical protein.
 
  
 0.921
MDS_0026
Hypothetical protein.
 
  
 0.921
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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