STRINGSTRING
MDS_0034 MDS_0034 MDS_0033 MDS_0033 MDS_0037 MDS_0037 MDS_0036 MDS_0036 MDS_0038 MDS_0038 MDS_0035 MDS_0035 MDS_1792 MDS_1792 MDS_0032 MDS_0032 MDS_2018 MDS_2018 MDS_1552 MDS_1552 MDS_4424 MDS_4424
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_0034Phospholipid/glycerol acyltransferase. (206 aa)    
Predicted Functional Partners:
MDS_0033
Phosphatidate cytidylyltransferase.
 
  
 0.989
MDS_0037
Alpha/beta hydrolase fold protein.
 
 
 0.981
MDS_0036
Dual specificity protein phosphatase.
 
  
 0.957
MDS_0038
CDP-alcohol phosphatidyltransferase.
 
 
 0.937
MDS_0035
Hypothetical protein.
  
    0.871
MDS_1792
Amino acid adenylation domain-containing protein.
  
 
 0.620
MDS_0032
Diguanylate cyclase.
       0.584
MDS_2018
Von Willebrand factor, type A.
  
     0.466
MDS_1552
Alpha/beta hydrolase fold protein.
  
 
 0.444
MDS_4424
Hypothetical protein.
  
     0.429
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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