STRINGSTRING
MDS_0035 MDS_0035 MDS_0036 MDS_0036 MDS_0033 MDS_0033 MDS_0034 MDS_0034 MDS_0037 MDS_0037 MDS_0038 MDS_0038 MDS_0032 MDS_0032 MDS_0039 MDS_0039 MDS_0040 MDS_0040
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_0035Hypothetical protein. (144 aa)    
Predicted Functional Partners:
MDS_0036
Dual specificity protein phosphatase.
  
    0.902
MDS_0033
Phosphatidate cytidylyltransferase.
  
    0.874
MDS_0034
Phospholipid/glycerol acyltransferase.
  
    0.871
MDS_0037
Alpha/beta hydrolase fold protein.
  
    0.871
MDS_0038
CDP-alcohol phosphatidyltransferase.
  
    0.732
MDS_0032
Diguanylate cyclase.
       0.583
MDS_0039
Phospholipid/glycerol acyltransferase.
  
    0.446
MDS_0040
D,D-heptose 1,7-bisphosphate phosphatase.
       0.414
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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