STRINGSTRING
MDS_0047 MDS_0047 MDS_0048 MDS_0048 MDS_1792 MDS_1792 MDS_4111 MDS_4111 msrA msrA MDS_0046 MDS_0046 folP folP MDS_0038 MDS_0038 MDS_4622 MDS_4622 MDS_4775 MDS_4775 MDS_4525 MDS_4525
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_0047Hypothetical protein. (878 aa)    
Predicted Functional Partners:
MDS_0048
Hypothetical protein.
 
   
 0.939
MDS_1792
Amino acid adenylation domain-containing protein.
     
 0.584
MDS_4111
Phosphoesterase, PA-phosphatase related protein.
 
  
 0.569
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.535
MDS_0046
Type IV pilus assembly PilZ.
       0.532
folP
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
     
 0.532
MDS_0038
CDP-alcohol phosphatidyltransferase.
  
  
 0.527
MDS_4622
PAS/PAC sensor signal transduction histidine kinase.
  
  
 0.522
MDS_4775
Glycosyl transferase family protein.
  
  
 0.516
MDS_4525
PAS/PAC sensor signal transduction histidine kinase.
  
  
 0.511
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.