STRINGSTRING
MDS_0081 MDS_0081 MDS_1792 MDS_1792 MDS_0082 MDS_0082 MDS_2346 MDS_2346 MDS_0992 MDS_0992 MDS_2293 MDS_2293 MDS_4816 MDS_4816 betC betC MDS_1488 MDS_1488 MDS_1498 MDS_1498 MDS_0084 MDS_0084
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_0081Sulphate transporter. (523 aa)    
Predicted Functional Partners:
MDS_1792
Amino acid adenylation domain-containing protein.
  
 
 0.634
MDS_0082
Substrate-binding region of ABC-type glycine betaine transport system.
       0.608
MDS_2346
NADH dehydrogenase subunit M.
  
 
 0.599
MDS_0992
Cytochrome b/b6 domain-containing protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 
 0.584
MDS_2293
Protein tyrosine/serine phosphatase.
   
   0.565
MDS_4816
Hypothetical protein.
    
   0.548
betC
Sulfatase.
     
 0.544
MDS_1488
NADH dehydrogenase (quinone).
  
  
 0.432
MDS_1498
Putative monovalent cation/H+ antiporter subunit A.
  
  
 0.432
MDS_0084
Regulatory protein, LysR:LysR, substrate-binding protein; Belongs to the LysR transcriptional regulatory family.
       0.412
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.