STRINGSTRING
MDS_0101 MDS_0101 MDS_3278 MDS_3278 MDS_0898 MDS_0898 MDS_2794 MDS_2794 MDS_2797 MDS_2797 MDS_3907 MDS_3907 MDS_0099 MDS_0099 MDS_3904 MDS_3904 MDS_2561 MDS_2561
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_0101Hypothetical protein. (71 aa)    
Predicted Functional Partners:
MDS_3278
Protein of unknown function DUF883, ElaB.
   
    0.526
MDS_0898
AsmA family protein.
   
    0.523
MDS_2794
Hypothetical protein.
   
    0.521
MDS_2797
CsbD family protein.
   
    0.521
MDS_3907
CsbD family protein; Belongs to the UPF0337 (CsbD) family.
   
    0.521
MDS_0099
TonB-dependent receptor.
       0.508
MDS_3904
Hypothetical protein.
  
    0.506
MDS_2561
DNA-binding transcriptional activator OsmE.
   
    0.474
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.