STRINGSTRING
MDS_0141 MDS_0141 MDS_0140 MDS_0140 MDS_0142 MDS_0142 MDS_0143 MDS_0143 MDS_0139 MDS_0139 MDS_0138 MDS_0138 MDS_0131 MDS_0131 MDS_0132 MDS_0132 MDS_0133 MDS_0133 MDS_0135 MDS_0135 MDS_0889 MDS_0889
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_0141ABC-type multidrug transport system, ATPase component. (308 aa)    
Predicted Functional Partners:
MDS_0140
Nitrous oxidase accessory protein.
 
 0.995
MDS_0142
ABC-type transport system involved in multi-copper enzyme maturation.
 
 
 0.995
MDS_0143
Lipoprotein involved in nitrous oxide reduction.
 
 
 0.981
MDS_0139
Nitrous-oxide reductase.
 
 
 0.979
MDS_0138
Regulatory protein NosR.
 
  
 0.955
MDS_0131
Nitric oxide reductase activation protein.
 
    0.878
MDS_0132
Nitric-oxide reductase subunit B.
 
  
 0.857
MDS_0133
Nitric oxide reductase, cytochrome c-containing subunit.
 
    0.761
MDS_0135
Cytochrome c oxidase subunit III family protein.
 
    0.630
MDS_0889
Hypothetical protein.
  
 
 0.628
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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