STRINGSTRING
MDS_0156 MDS_0156 MDS_1037 MDS_1037 MDS_0319 MDS_0319 MDS_3891 MDS_3891 MDS_1638 MDS_1638 MDS_2240 MDS_2240 MDS_2968 MDS_2968 MDS_0469 MDS_0469 MDS_0694 MDS_0694 MDS_1474 MDS_1474 MDS_3228 MDS_3228
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_0156Hypothetical protein. (213 aa)    
Predicted Functional Partners:
MDS_1037
Hypothetical protein.
  
     0.772
MDS_0319
Hypothetical protein.
  
     0.770
MDS_3891
Hypothetical protein.
  
     0.760
MDS_1638
Hypothetical protein.
  
     0.758
MDS_2240
Hypothetical protein.
  
     0.752
MDS_2968
Response regulator receiver protein.
  
     0.744
MDS_0469
Putative CheW protein.
  
     0.742
MDS_0694
Hypothetical protein.
  
     0.708
MDS_1474
Hypothetical protein.
  
     0.701
MDS_3228
Hypothetical protein.
  
     0.690
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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