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MDS_0161 MDS_0161 coxB coxB ctaD-2 ctaD-2 ctaD ctaD coxB-2 coxB-2 MDS_0160 MDS_0160 MDS_0992 MDS_0992 cyoB cyoB cyoA cyoA cyoE cyoE MDS_0163 MDS_0163
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
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Coexpression
Experiments
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[Homology]
Score
MDS_0161Cytochrome c oxidase, subunit III. (298 aa)    
Predicted Functional Partners:
coxB
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 0.999
ctaD-2
Cytochrome-c oxidase; Belongs to the heme-copper respiratory oxidase family.
 
 0.997
ctaD
Cytochrome-c oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
 0.996
coxB-2
Cytochrome c, monohem.
 
 0.996
MDS_0160
Cytochrome c oxidase assembly protein.
 
  
 0.990
MDS_0992
Cytochrome b/b6 domain-containing protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 
 0.981
cyoB
Cytochrome o ubiquinol oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
 0.966
cyoA
Putative cytochrome o ubiquinol oxidase subunit II.
 
 0.965
cyoE
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
  
 0.955
MDS_0163
Hypothetical protein.
 
  
 0.950
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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