STRINGSTRING
MDS_0164 MDS_0164 MDS_0163 MDS_0163 MDS_0165 MDS_0165 cyoE cyoE coxB coxB MDS_0160 MDS_0160 MDS_0161 MDS_0161 ctaD ctaD MDS_0162 MDS_0162 coxB-2 coxB-2 MDS_2572 MDS_2572
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_0164Hypothetical protein. (192 aa)    
Predicted Functional Partners:
MDS_0163
Hypothetical protein.
 
  
 0.988
MDS_0165
Cytochrome oxidase assembly.
 
 
 0.969
cyoE
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
  
 0.957
coxB
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.954
MDS_0160
Cytochrome c oxidase assembly protein.
 
 
 0.936
MDS_0161
Cytochrome c oxidase, subunit III.
 
  
 0.934
ctaD
Cytochrome-c oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
 
  
 0.890
MDS_0162
Hypothetical protein.
 
     0.834
coxB-2
Cytochrome c, monohem.
 
 
 0.821
MDS_2572
Hypothetical protein.
 
    0.727
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.