STRINGSTRING
MDS_0174 MDS_0174 MDS_3716 MDS_3716 MDS_0175 MDS_0175 MDS_0176 MDS_0176 dsbB dsbB MDS_0968 MDS_0968 MDS_0995 MDS_0995 bamE bamE MDS_0173 MDS_0173 arsC arsC MDS_3336 MDS_3336
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_0174DsbA oxidoreductase. (208 aa)    
Predicted Functional Partners:
MDS_3716
Protein-disulfide isomerase-like protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.
 
  
 0.755
MDS_0175
Endonuclease/exonuclease/phosphatase.
       0.747
MDS_0176
Diguanylate cyclase.
       0.747
dsbB
Disulfide bond formation protein DsbB; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family.
 
  
 0.712
MDS_0968
Toluene tolerance family protein.
  
 
   0.704
MDS_0995
ClpXP protease specificity-enhancing factor.
  
   
 0.693
bamE
SmpA/OmlA domain-containing protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
     0.687
MDS_0173
Cytochrome c, class I.
 
     0.675
arsC
Arsenate reductase.
   
 
 0.671
MDS_3336
Arsenate reductase and related protein; Belongs to the ArsC family.
   
 
 0.671
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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