Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MDS_0181 | MDS_0182 | Response regulator receiver protein. | Multi-sensor hybrid histidine kinase. | 0.962 |
MDS_0181 | MDS_0185 | Response regulator receiver protein. | Response regulator receiver sensor signal transduction histidine kinase. | 0.929 |
MDS_0181 | MDS_0791 | Response regulator receiver protein. | Integral membrane sensor hybrid histidine kinase. | 0.970 |
MDS_0181 | MDS_2274 | Response regulator receiver protein. | Putative sensory box histidine kinase/response regulator. | 0.920 |
MDS_0181 | MDS_2929 | Response regulator receiver protein. | PAS/PAC sensor hybrid histidine kinase. | 0.888 |
MDS_0181 | MDS_3132 | Response regulator receiver protein. | Multi-sensor hybrid histidine kinase. | 0.935 |
MDS_0181 | MDS_3170 | Response regulator receiver protein. | Integral membrane sensor hybrid histidine protein kinase. | 0.972 |
MDS_0181 | MDS_3950 | Response regulator receiver protein. | Multi-sensor hybrid histidine kinase. | 0.991 |
MDS_0181 | MDS_4622 | Response regulator receiver protein. | PAS/PAC sensor signal transduction histidine kinase. | 0.927 |
MDS_0181 | MDS_4626 | Response regulator receiver protein. | Response regulator receiver modulated diguanylate cyclase. | 0.912 |
MDS_0182 | MDS_0181 | Multi-sensor hybrid histidine kinase. | Response regulator receiver protein. | 0.962 |
MDS_0182 | MDS_0185 | Multi-sensor hybrid histidine kinase. | Response regulator receiver sensor signal transduction histidine kinase. | 0.988 |
MDS_0182 | MDS_0791 | Multi-sensor hybrid histidine kinase. | Integral membrane sensor hybrid histidine kinase. | 0.993 |
MDS_0182 | MDS_2274 | Multi-sensor hybrid histidine kinase. | Putative sensory box histidine kinase/response regulator. | 0.995 |
MDS_0182 | MDS_2929 | Multi-sensor hybrid histidine kinase. | PAS/PAC sensor hybrid histidine kinase. | 0.985 |
MDS_0182 | MDS_3132 | Multi-sensor hybrid histidine kinase. | Multi-sensor hybrid histidine kinase. | 0.990 |
MDS_0182 | MDS_3170 | Multi-sensor hybrid histidine kinase. | Integral membrane sensor hybrid histidine protein kinase. | 0.998 |
MDS_0182 | MDS_3950 | Multi-sensor hybrid histidine kinase. | Multi-sensor hybrid histidine kinase. | 0.999 |
MDS_0182 | MDS_4622 | Multi-sensor hybrid histidine kinase. | PAS/PAC sensor signal transduction histidine kinase. | 0.991 |
MDS_0182 | MDS_4626 | Multi-sensor hybrid histidine kinase. | Response regulator receiver modulated diguanylate cyclase. | 0.958 |
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