STRINGSTRING
MDS_0184 MDS_0184 MDS_0183 MDS_0183 MDS_4530 MDS_4530 MDS_1872 MDS_1872 MDS_4139 MDS_4139 MDS_1816 MDS_1816 MDS_0182 MDS_0182 MDS_3950 MDS_3950 MDS_2996 MDS_2996 MDS_3050 MDS_3050 MDS_0466 MDS_0466
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_0184CheB methylesterase. (203 aa)    
Predicted Functional Partners:
MDS_0183
MCP methyltransferase, CheR-type.
  
 0.996
MDS_4530
CheA signal transduction histidine kinase.
 
 0.991
MDS_1872
CheA signal transduction histidine kinase.
 
 0.989
MDS_4139
Putative chemotaxis sensor/effector fusion protein.
 
 
 0.978
MDS_1816
MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
  
 0.976
MDS_0182
Multi-sensor hybrid histidine kinase.
 
 0.967
MDS_3950
Multi-sensor hybrid histidine kinase.
 
 0.965
MDS_2996
Methyl-accepting chemotaxis sensory transducer.
 
 0.962
MDS_3050
Methyl-accepting chemotaxis sensory transducer.
 
 0.962
MDS_0466
Protein-glutamate O-methyltransferase.
  
 0.951
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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