STRINGSTRING
MDS_0199 MDS_0199 MDS_3298 MDS_3298 MDS_3755 MDS_3755 MDS_4579 MDS_4579 MDS_0198 MDS_0198 MDS_0706 MDS_0706 ftsZ ftsZ MDS_0579 MDS_0579 MDS_1792 MDS_1792 phoU phoU MDS_3232 MDS_3232
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDS_0199Peptidase M23B. (298 aa)    
Predicted Functional Partners:
MDS_3298
Peptidase M23B.
 
  
 0.832
MDS_3755
Peptidase M23B.
  
   
 0.761
MDS_4579
Peptidase M23B.
 
   
 0.746
MDS_0198
Response regulator receiver protein.
     
 0.537
MDS_0706
N-acetylmuramoyl-L-alanine amidase.
 
  
 0.537
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
 
   
 0.517
MDS_0579
1A family penicillin-binding protein.
 
   
 0.493
MDS_1792
Amino acid adenylation domain-containing protein.
 
  
 0.482
phoU
Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake.
  
  
 0.433
MDS_3232
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
  
   
 0.406
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
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