Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MDS_0215 | MDS_0216 | MDS_0215 | MDS_0216 | Glycolate oxidase iron-sulfur subunit. | Glycolate oxidase FAD binding subunit. | 0.999 |
MDS_0215 | MDS_0217 | MDS_0215 | MDS_0217 | Glycolate oxidase iron-sulfur subunit. | Glycolate oxidase subunit GlcD. | 0.999 |
MDS_0215 | MDS_1257 | MDS_0215 | MDS_1257 | Glycolate oxidase iron-sulfur subunit. | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein. | 0.914 |
MDS_0215 | MDS_2362 | MDS_0215 | MDS_2362 | Glycolate oxidase iron-sulfur subunit. | Isocitrate lyase. | 0.922 |
MDS_0215 | MDS_2460 | MDS_0215 | MDS_2460 | Glycolate oxidase iron-sulfur subunit. | Hydroperoxidase II; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.900 |
MDS_0215 | MDS_3420 | MDS_0215 | MDS_3420 | Glycolate oxidase iron-sulfur subunit. | Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase. | 0.905 |
MDS_0215 | MDS_3965 | MDS_0215 | MDS_3965 | Glycolate oxidase iron-sulfur subunit. | Glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.914 |
MDS_0215 | MDS_4332 | MDS_0215 | MDS_4332 | Glycolate oxidase iron-sulfur subunit. | Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. | 0.904 |
MDS_0215 | glcB | MDS_0215 | MDS_0213 | Glycolate oxidase iron-sulfur subunit. | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.956 |
MDS_0215 | glcB-2 | MDS_0215 | MDS_4415 | Glycolate oxidase iron-sulfur subunit. | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.932 |
MDS_0216 | MDS_0215 | MDS_0216 | MDS_0215 | Glycolate oxidase FAD binding subunit. | Glycolate oxidase iron-sulfur subunit. | 0.999 |
MDS_0216 | MDS_0217 | MDS_0216 | MDS_0217 | Glycolate oxidase FAD binding subunit. | Glycolate oxidase subunit GlcD. | 0.999 |
MDS_0216 | MDS_1257 | MDS_0216 | MDS_1257 | Glycolate oxidase FAD binding subunit. | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein. | 0.915 |
MDS_0216 | MDS_2362 | MDS_0216 | MDS_2362 | Glycolate oxidase FAD binding subunit. | Isocitrate lyase. | 0.905 |
MDS_0216 | MDS_2460 | MDS_0216 | MDS_2460 | Glycolate oxidase FAD binding subunit. | Hydroperoxidase II; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.915 |
MDS_0216 | MDS_3420 | MDS_0216 | MDS_3420 | Glycolate oxidase FAD binding subunit. | Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase. | 0.908 |
MDS_0216 | MDS_3965 | MDS_0216 | MDS_3965 | Glycolate oxidase FAD binding subunit. | Glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.926 |
MDS_0216 | MDS_4332 | MDS_0216 | MDS_4332 | Glycolate oxidase FAD binding subunit. | Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. | 0.906 |
MDS_0216 | glcB | MDS_0216 | MDS_0213 | Glycolate oxidase FAD binding subunit. | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.948 |
MDS_0216 | glcB-2 | MDS_0216 | MDS_4415 | Glycolate oxidase FAD binding subunit. | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.920 |
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