STRINGSTRING
mdcB mdcB mdcC mdcC MDS_0237 MDS_0237 MDS_0239 MDS_0239 mdcE mdcE mdcA mdcA mdcH mdcH madL madL MDS_3403 MDS_3403 madM madM MDS_0243 MDS_0243
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdcBtriphosphoribosyl-dephospho-CoA synthase; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family. (292 aa)    
Predicted Functional Partners:
mdcC
Malonate decarboxylase subunit delta; Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism.
 
  
 0.993
MDS_0237
Malonate decarboxylase subunit beta.
 
  
 0.991
MDS_0239
phosphoribosyl-dephospho-CoA transferase.
 
  
 0.991
mdcE
Malonate decarboxylase, gamma subunit.
 
  
 0.981
mdcA
Malonate decarboxylase alpha subunit.
  
 0.974
mdcH
Malonyl CoA-acyl carrier protein transacylase.
 
    0.968
madL
Malonate transporter, MadL subunit.
 
    0.928
MDS_3403
Citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.894
madM
Malonate transporter, MadM subunit.
 
     0.827
MDS_0243
Malonate utilization transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.718
Your Current Organism:
Pseudomonas mendocina NK01
NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.